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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs10165493 chr2:201973935 T/C 0.000171 479 16.07 15.77 5.07 KM Plot
THCA rs10166581 chr2:29175207 A/G 0.00011 490 14.3 14.8 16.13 KM Plot
THCA rs10174838 chr2:55241216 A/T 0.000158 482 12.5 16.22 17.73 KM Plot
THCA rs10184527 chr2:29064981 C/A 9.55E-5 488 14.98 16.85 15.93 KM Plot
THCA rs10187155 chr2:29050318 T/G 9.62E-5 489 14.98 17.08 15.9 KM Plot
THCA rs10189355 chr2:238091304 C/A 0.000176 490 15.28 16.57 39.2 KM Plot
THCA rs10191057 chr2:29123047 A/G 0.00011 490 14.3 15.22 16.07 KM Plot
THCA rs10191120 chr2:28997936 A/G 0.000113 490 15.32 17.88 14.98 KM Plot
THCA rs10194347 chr2:201942480 G/A 0.000139 486 16.02 15.83 4.33 KM Plot
THCA rs10201333 chr2:238091260 A/T 0.000176 490 15.28 16.57 39.2 KM Plot
THCA rs10204787 chr2:201762147 C/T 0.000101 490 16.02 16.3 5.1 KM Plot
THCA rs10205971 chr2:201958201 A/G 0.000157 481 16.07 15.77 5.07 KM Plot
THCA rs10208840 chr2:128449813 T/G 0.000102 484 19.9 16.85 15.33 KM Plot
THCA rs10209057 chr2:68742493 C/T 7.79E-13 490 15.23 18.08 10.5 KM Plot
THCA rs10209953 chr2:29112705 C/A 0.00011 490 14.3 15.22 16.07 KM Plot